Sam_g11772


Description : not classified & original description: none


Gene families : OG0000442 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000442_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g11772
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
AT1G13390 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 OrthoFinder output from all 47 species
AT3G02555 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Als_g08616 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19806 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.19G044800.1 Ceric.19G044800 not classified & original description: pacid=50576291... 0.02 OrthoFinder output from all 47 species
Ceric.36G060700.1 Ceric.36G060700 not classified & original description: pacid=50569156... 0.03 OrthoFinder output from all 47 species
Len_g14328 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08120 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g22015 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_95313g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g08506 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g21476 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000698 No alias not classified & original description: CDS=492-953 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004316 No alias not classified & original description: CDS=222-752 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0245.g026688 No alias not classified & original description: CDS=25-543 0.03 OrthoFinder output from all 47 species
Sam_g08532 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g009360.4.1 Solyc05g009360 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g08729 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!