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  5. Sam_g11849

Sam_g11849


Description : class VIII myosin microfilament-based motor protein & original description: none


Gene families : OG0000203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g11849

Target Alias Description ECC score Gene Family Method Actions
AT5G20470 No alias myosin, putative 0.02 OrthoFinder output from all 47 species
AT5G43900 XI-6, ATMYA2, XI-2, MYA2 myosin 2 0.02 OrthoFinder output from all 47 species
Adi_g104758 ATVIIIA, VIIIA class VIII myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene56313.t1 XIF, ATMYO5,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03503 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Gb_22496 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein 0.02 OrthoFinder output from all 47 species
Gb_41099 XIC, ATXIC Myosin-9 OS=Arabidopsis thaliana (sp|f4hxp9|myo9_arath : 977.0) 0.03 OrthoFinder output from all 47 species
LOC_Os03g48140.1 ATXIK, XI-17,... class XI myosin microfilament-based motor protein 0.02 OrthoFinder output from all 47 species
LOC_Os03g53660.1 XIF, ATMYO5,... class XI myosin microfilament-based motor protein 0.02 OrthoFinder output from all 47 species
LOC_Os05g46030.1 ATXIK, XI-17,... Myosin-17 OS=Arabidopsis thaliana (sp|f4k5j1|myo17_arath... 0.02 OrthoFinder output from all 47 species
Len_g01925 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Len_g08332 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Msp_g13318 ATVIIIA, VIIIA class VIII myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Ore_g16120 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Pnu_g13851 XIC, ATXIC class XI myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Solyc07g041150.4.1 ATXIK, XI-17,... class XI myosin microfilament-based motor protein 0.02 OrthoFinder output from all 47 species
Spa_g15875 ATVIIIA, VIIIA class VIII myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Zm00001e010552_P001 ATMYOS1, ATM4,... class VIII myosin microfilament-based motor protein 0.02 OrthoFinder output from all 47 species
Zm00001e012044_P001 XIF, ATMYO5,... class XI myosin microfilament-based motor protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016459 myosin complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR001609 Myosin_head_motor_dom 3 589
No external refs found!