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  5. Sam_g12041

Sam_g12041


Description : not classified & original description: none


Gene families : OG0000038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g12041

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00093p00042400 TBL26,... Protein trichome birefringence-like 26 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Ala_g13615 TBL13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08528.t1 TBL18, Aspi01Gene08528 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19663.t2 TBL5, Aspi01Gene19663 polysaccharide O-acetyltransferase *(TBR) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene21383.t1 TBL13, Aspi01Gene21383 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21384.t1 TBL13, Aspi01Gene21384 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26562.t2 Aspi01Gene26562 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g01764 TBL7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g23023 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g17358 TBL1 polysaccharide O-acetyltransferase *(TBR) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01013788001 TBL2 Protein trichome birefringence-like 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
MA_245850g0010 TBL24 mannan O-acetyltransferase (MOAT) 0.03 OrthoFinder output from all 47 species
Mp5g00500.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pnu_g17559 TBL25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006581 TBL26 mannan O-acetyltransferase *(MOAT) & original... 0.02 OrthoFinder output from all 47 species
Solyc02g082940.3.1 TBL34, Solyc02g082940 xylan O-acetyltransferase (XOAT) 0.02 OrthoFinder output from all 47 species
Tin_g20317 TBL5 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016740 transferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
MF GO:0008252 nucleotidase activity IEP HCCA
MF GO:0008253 5'-nucleotidase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR025846 TBL_N 141 195
IPR026057 PC-Esterase 197 482
No external refs found!