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  5. Sam_g12053

Sam_g12053


Description : not classified & original description: none


Gene families : OG0000009 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g12053
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
Adi_g005524 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g017972 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g042541 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20613 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21181 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g05058 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g56978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23948 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene39627.t1 Aspi01Gene39627 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15333 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g18555 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g74521 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14986 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27777 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g31569 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g31815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c11_4730V3.1 Pp3c11_4730 No annotation 0.01 OrthoFinder output from all 47 species
Ppi_g52070 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g01340 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g03702 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g12978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g13984 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g13985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g20008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g20013 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g20136 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g22751 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39607 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g45461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48236 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g51102 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR025724 GAG-pre-integrase_dom 63 123
IPR001584 Integrase_cat-core 138 237
No external refs found!