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  5. Sam_g12354

Sam_g12354


Description : not classified & original description: none


Gene families : OG0000540 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000540_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g12354
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00151900 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00030p00143350 MKS1,... No description available 0.03 OrthoFinder output from all 47 species
AT1G21326 No alias VQ motif-containing protein 0.03 OrthoFinder output from all 47 species
Aev_g05089 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g23545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29900 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g15422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08078 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17650 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001661001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_37589 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g01260.1 MKS1, LOC_Os08g01260 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_370498g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_63411g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g39094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33608 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g060470.1.1 MKS1, Solyc06g060470 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g38545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13936 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002417_P001 Zm00001e002417 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e037399_P001 MKS1, Zm00001e037399 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR008889 VQ 48 72
No external refs found!