Sam_g12568


Description : regulatory triphosphatase *(TTM) of Programmed Cell Death & original description: none


Gene families : OG0002097 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002097_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g12568

Target Alias Description ECC score Gene Family Method Actions
AT1G73980 No alias Phosphoribulokinase / Uridine kinase family 0.03 OrthoFinder output from all 47 species
Cre13.g590300 No alias No description available 0.02 OrthoFinder output from all 47 species
Dde_g12503 No alias regulatory triphosphatase *(TTM) of Programmed Cell... 0.03 OrthoFinder output from all 47 species
Pnu_g32828 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0091.g018819 No alias regulatory triphosphatase *(TTM) of Programmed Cell... 0.03 OrthoFinder output from all 47 species
Solyc04g005140.2.1 Solyc04g005140 no description available(sp|q9c664|ttm2_arath : 415.0) 0.03 OrthoFinder output from all 47 species
Solyc05g010340.3.1 Solyc05g010340 no description available(sp|q9c664|ttm2_arath : 941.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030008 TRAPP complex IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR023577 CYTH_domain 32 185
No external refs found!