Sam_g12639


Description : not classified & original description: none


Gene families : OG0008173 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008173_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g12639
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
Dac_g02110 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g00479 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g07618 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0050661 NADP binding IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000120 RNA polymerase I transcription regulator complex IEP HCCA
CC GO:0000228 nuclear chromosome IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006360 transcription by RNA polymerase I IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001342 HDH_cat 177 313
IPR005106 Asp/hSer_DH_NAD-bd 16 165
No external refs found!