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  5. Lfl_g26642

Lfl_g26642 (BBC1, RSU2, ATBBC1)


Aliases : BBC1, RSU2, ATBBC1

Description : component *(eL13) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000911 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000911_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g26642
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00111280 BBC1, RSU2,... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
AT3G49010 BBC1, RSU2, ATBBC1 breast basic conserved 1 0.04 OrthoFinder output from all 47 species
Als_g38451 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aop_g02719 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ceric.06G067700.1 BBC1, RSU2,... component *(eL13) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ceric.21G071200.1 BBC1, RSU2,... component *(eL13) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ceric.31G053900.1 BBC1, RSU2,... component *(eL13) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ceric.38G000300.1 BBC1, RSU2,... component *(eL13) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020629.36 BBC1, RSU2, ATBBC1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Dac_g06660 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ehy_g04408 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01030767001 BBC1, RSU2, ATBBC1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
LOC_Os03g37970.1 BBC1, RSU2,... component RPL13 of LSU proteome component 0.04 OrthoFinder output from all 47 species
LOC_Os06g02510.2 BBC1, RSU2,... component RPL13 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Lfl_g24377 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Mp1g04920.1 BBC1, RSU2, ATBBC1 component RPL13 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Mp2g19790.1 BBC1, RSU2, ATBBC1 component RPL13 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Msp_g00929 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ore_g11184 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Pp3c1_26280V3.1 BBC1, RSU2,... breast basic conserved 1 0.03 OrthoFinder output from all 47 species
Sam_g17931 No alias component *(eL13) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g40235 No alias component *(eL13) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Solyc08g075700.3.1 BBC1, RSU2,... component RPL13 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Spa_g05295 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Spa_g14938 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Spa_g24037 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Tin_g03031 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Zm00001e018804_P001 BBC1, RSU2,... component RPL13 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Zm00001e028430_P003 BBC1, RSU2,... component RPL13 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e031172_P001 BBC1, RSU2,... component RPL13 of LSU proteome component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
InterPro domains Description Start Stop
IPR001380 Ribosomal_L13e 6 184
No external refs found!