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  5. Sam_g13010

Sam_g13010


Description : substrate adaptor of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0000527 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000527_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g13010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00073p00116690 FBW2,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Adi_g086567 No alias substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Als_g26827 SKIP1 substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.02 OrthoFinder output from all 47 species
Aob_g16109 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aspi01Gene29431.t1 FBW2, Aspi01Gene29431 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g04397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26536 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Msp_g17770 No alias regulatory protein *(FBW2) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Nbi_g12157 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Pnu_g16969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g52174 No alias substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Solyc08g013820.3.1 Solyc08g013820 Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g15037 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g00863 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquiTin ligase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 208 228
No external refs found!