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  5. Lfl_g26673

Lfl_g26673


Description : not classified & original description: none


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g26673

Target Alias Description ECC score Gene Family Method Actions
AT1G72200 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G76410 ATL8 RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G16720 ATL2, TL2 TOXICOS EN LEVADURA 2 0.04 OrthoFinder output from all 47 species
AT4G35480 RHA3B RING-H2 finger A3B 0.04 OrthoFinder output from all 47 species
Adi_g007002 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Adi_g032305 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060420 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aob_g04978 XERICO E3 ubiquitin ligase *(BRH) & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g32159 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aop_g21168 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g010074 No alias not classified & original description: CDS=1-1416 0.04 OrthoFinder output from all 47 species
Azfi_s0079.g038347 ATL5 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Cba_g03683 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.06G057500.1 Ceric.06G057500 not classified & original description: pacid=50619209... 0.03 OrthoFinder output from all 47 species
Ceric.13G013700.1 RHA3A, Ceric.13G013700 not classified & original description: pacid=50636450... 0.03 OrthoFinder output from all 47 species
Cre11.g476250 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Dcu_g23227 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dde_g01188 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30250 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015682001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
LOC_Os02g35144.1 LOC_Os02g35144 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
LOC_Os04g49160.1 LOC_Os04g49160 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g29710.1 LOC_Os05g29710 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Mp3g00390.1 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Msp_g20433 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Nbi_g06650 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ore_g40735 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g00384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13643 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17726 ATL31, CNI1 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ppi_g21936 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012209 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022556 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sam_g03342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g066430.3.1 ATL2, TL2, Solyc01g066430 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc01g088450.2.1 Solyc01g088450 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc01g109820.1.1 Solyc01g109820 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc02g085270.1.1 Solyc02g085270 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g37346 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Tin_g06774 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.03 OrthoFinder output from all 47 species
Zm00001e007956_P001 ATRING1, RING1,... RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e023832_P001 ATL31, CNI1,... RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 187 230
No external refs found!