Sam_g13302


Description : ribosome biogenesis factor *(CRASS) & original description: none


Gene families : OG0007938 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007938_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g13302

Target Alias Description ECC score Gene Family Method Actions
AT5G14910 No alias Heavy metal transport/detoxification superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g02821 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g13367 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g04787 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g06536 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0250.g060247 No alias ribosome biogenesis factor *(CRASS) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g36209 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04247 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g05290 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032527001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_22864 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g27100.1 LOC_Os05g27100 ribosome biogenesis factor (CRASS) 0.02 OrthoFinder output from all 47 species
Lfl_g37391 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.03 OrthoFinder output from all 47 species
MA_59576g0010 No alias ribosome biogenesis factor (CRASS) 0.04 OrthoFinder output from all 47 species
Mp6g04290.1 No alias ribosome biogenesis factor (CRASS) 0.04 OrthoFinder output from all 47 species
Ore_g05841 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g00577 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0180.g024792 No alias ribosome biogenesis factor *(CRASS) & original... 0.02 OrthoFinder output from all 47 species
Solyc02g087150.3.1 Solyc02g087150 ribosome biogenesis factor (CRASS) 0.03 OrthoFinder output from all 47 species
Spa_g10440 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e031534_P001 Zm00001e031534 ribosome biogenesis factor (CRASS) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA

No InterPro domains available for this sequence

No external refs found!