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  5. Sam_g13427

Sam_g13427


Description : transcriptional repressor *(IAA/AUX) & original description: none


Gene families : OG0000146 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000146_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g13427
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AT2G22670 IAA8 indoleacetic acid-induced protein 8 0.03 OrthoFinder output from all 47 species
AT3G16500 PAP1, IAA26 phytochrome-associated protein 1 0.02 OrthoFinder output from all 47 species
AT4G29080 IAA27, PAP2 phytochrome-associated protein 2 0.02 OrthoFinder output from all 47 species
Adi_g006288 IAA13 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g014924 IAA13 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059235 IAA27, PAP2 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g107485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g04091 IAA16 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14255 SLR, IAA14 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18407 AXR3, IAA17 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69403 IAA9 transcriptional repressor *(IAA/AUX) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.29G001400.1 IAA9, Ceric.29G001400 transcriptional repressor *(IAA/AUX) & original... 0.02 OrthoFinder output from all 47 species
Dac_g11685 IAA27, PAP2 transcriptional repressor *(IAA/AUX) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g01587 IAA12, BDL transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g09948 IAA8 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07141 IAA8 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016972001 PAP1, IAA26 Phytohormones.auxin.perception and signal... 0.02 OrthoFinder output from all 47 species
MA_608803g0010 IAA16 Auxin-responsive protein IAA16 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp8g07850.1 IAA33 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g14922 SLR, IAA14 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15924 IAA8 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00579 IAA8 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g01098 IAA8 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02661 IAA3, SHY2 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20831 IAA11 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g31600 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19076 IAA9 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18437 No alias transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51354 No alias transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g120390.3.1 AXR3, IAA17,... Auxin-responsive protein IAA17 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc04g076850.3.1 IAA9, Solyc04g076850 Auxin-responsive protein IAA9 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc06g066020.3.1 IAA29, Solyc06g066020 Auxin-responsive protein IAA29 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g05340 IAA13 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g13129 IAA8 transcriptional repressor *(IAA/AUX) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17022 IAA13 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21406 IAA8 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23172 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g24355 IAA16 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g54237 IAA16 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018053_P002 IAA16, Zm00001e018053 Auxin-responsive protein IAA30 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 60 301
No external refs found!