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  5. Sam_g13621

Sam_g13621


Description : ABC1 atypical protein kinase & original description: none


Gene families : OG0000250 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000250_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g13621
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
Adi_g009611 No alias ABC1 atypical protein kinase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g02543 No alias ABC1 atypical protein kinase & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g05459 No alias ABC1 atypical protein kinase & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g21866 No alias ABC1 atypical protein kinase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11686 No alias ABC1 atypical protein kinase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13420.t1 Aspi01Gene13420 ABC1 atypical protein kinase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0218.g058567 No alias not classified & original description: CDS=31-2250 0.03 OrthoFinder output from all 47 species
Ceric.02G050500.1 Ceric.02G050500 ABC1 atypical protein kinase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.07G081000.1 Ceric.07G081000 ABC1 atypical protein kinase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.14G095700.1 Ceric.14G095700 ABC1 atypical protein kinase & original description:... 0.03 OrthoFinder output from all 47 species
Cre05.g246552 No alias Protein modification.phosphorylation.atypical kinase... 0.02 OrthoFinder output from all 47 species
Dac_g11829 No alias ABC1 atypical protein kinase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g12807 No alias ABC1 atypical protein kinase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01706 No alias ABC1 atypical protein kinase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22743 No alias ABC1 atypical protein kinase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01523 No alias ABC1 atypical protein kinase & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g57160.1 LOC_Os02g57160 protein kinase (ABC1) 0.02 OrthoFinder output from all 47 species
LOC_Os04g54790.1 LOC_Os04g54790 protein kinase (ABC1) 0.02 OrthoFinder output from all 47 species
Lfl_g03314 No alias ABC1 atypical protein kinase & original description: none 0.02 OrthoFinder output from all 47 species
Mp5g19740.1 No alias protein kinase (ABC1) 0.03 OrthoFinder output from all 47 species
Msp_g02480 No alias ABC1 atypical protein kinase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04890 No alias ABC1 atypical protein kinase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g15038 ATATH8 ABC1 atypical protein kinase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g10406 No alias ABC1 atypical protein kinase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18173 No alias ABC1 atypical protein kinase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004361 No alias ABC1 atypical protein kinase & original description: CDS=1-2616 0.02 OrthoFinder output from all 47 species
Solyc08g074560.3.1 Solyc08g074560 protein kinase (ABC1) 0.02 OrthoFinder output from all 47 species
Spa_g22767 No alias ABC1 atypical protein kinase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13340 No alias ABC1 atypical protein kinase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004147 ABC1_dom 256 495
No external refs found!