Sam_g13769


Description : not classified & original description: none


Gene families : OG0001410 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001410_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g13769

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00151130 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G73170 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 OrthoFinder output from all 47 species
Adi_g108757 SPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18245 SPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24193.t1 Aspi01Gene24193 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0032.g024929 No alias not classified & original description: CDS=579-2060 0.03 OrthoFinder output from all 47 species
Dde_g06628 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g11178 SPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os06g06190.1 LOC_Os06g06190 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Len_g30692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08861 SPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10427944g0010 SPD1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10433286g0010 SPD1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g10530 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g21651 SPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g45555 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo410877 SPD1 No description available 0.02 OrthoFinder output from all 47 species
Solyc04g005830.3.1 Solyc04g005830 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc11g008250.2.1 SPD1, Solyc11g008250 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc12g014150.3.1 Solyc12g014150 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e030045_P004 Zm00001e030045 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004325 ferrochelatase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR045735 Spore_III_AA_AAA+_ATPase 47 197
No external refs found!