Sam_g14552

Description : nucleocytoplasmic import karyopherin *(IMB1) & original description: none

Gene families : OG0001300 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001300_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g14552

Target	Alias	Description	ECC score	Gene Family Method
AT5G53480	No alias	ARM repeat superfamily protein	0.02	OrthoFinder output from all 47 species
Cba_g13735	No alias	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021348.90	No alias	Protein translocation.nucleus.nucleocytoplasmic...	0.02	OrthoFinder output from all 47 species
Len_g14772	No alias	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0144.g022936	No alias	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.05	OrthoFinder output from all 47 species
Solyc09g005010.4.1	Solyc09g005010	IMB1 nucleocytoplasmic import karyopherin	0.02	OrthoFinder output from all 47 species
Tin_g20356	No alias	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
MF	GO:0031267	small GTPase binding	IEA	Interproscan
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
MF	GO:0051020	GTPase binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005096	GTPase activator activity	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
MF	GO:0008047	enzyme activator activity	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
MF	GO:0030695	GTPase regulator activity	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
MF	GO:0140359	ABC-type transporter activity	IEP	HCCA
MF	GO:0140677	molecular function activator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001494	Importin-beta_N	23	102

External Links

No external refs found!