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  5. Sam_g14611

Sam_g14611


Description : subfamily ABCG transporter & original description: none


Gene families : OG0000438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g14611

Target Alias Description ECC score Gene Family Method Actions
Aev_g05490 No alias sporopollenin precursor exporter *(ABCG26) & original... 0.03 OrthoFinder output from all 47 species
Ala_g18590 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12665 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21285 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g63978 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12549.t2 Aspi01Gene12549 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17387 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g06815 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09211 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014402001 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Lfl_g28365 ABCG26, WBC27 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp3g19930.1 ABCG26, WBC27 ABC transporter G family member 26 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Pnu_g09273 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30197 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09850 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e009010_P001 ABCG25,... subfamily ABCG transporter 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 146 296
IPR013525 ABC_2_trans 482 690
No external refs found!