Description : regulatory factor *(TZF) of mRNA stress granule formation & original description: none
Gene families : OG0000156 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000156_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sam_g15237 | |
| Cluster | HCCA: Cluster_29 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G40140 | SZF2, ATSZF2, ZFAR1, CZF1 | zinc finger (CCCH-type) family protein | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.04G078500.1 | Ceric.04G078500 | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01024728001 | No alias | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01032807001 | SZF2, ATSZF2, ZFAR1, CZF1 | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g03760.1 | LOC_Os05g03760 | mRNA-binding regulatory factor (TZF) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os10g32800.1 | LOC_Os10g32800 | Zinc finger CCCH domain-containing protein 67 OS=Oryza... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g02270 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g04930 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g16529 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e027566_P001 | Zm00001e027566 | mRNA-binding regulatory factor (TZF) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
| No external refs found! |
