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  5. Sam_g15885

Sam_g15885


Description : EC_2.4 glycosyltransferase & original description: none


Gene families : OG0001258 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001258_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g15885

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00019920 ATSUS3, SUS3,... Carbohydrate metabolism.sucrose... 0.02 OrthoFinder output from all 47 species
AT4G02280 ATSUS3, SUS3 sucrose synthase 3 0.01 OrthoFinder output from all 47 species
Aev_g20982 ATSUS3, SUS3 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08941 ATSUS3, SUS3 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g38079 ATSUS3, SUS3 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g18183 ATSUS3, SUS3 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0638.g080509 SSA, ATSUS2, SUS2 EC_2.4 glycosyltransferase & original description: CDS=349-2793 0.03 OrthoFinder output from all 47 species
Ceric.13G060100.1 ATSUS3, SUS3,... EC_2.4 glycosyltransferase & original description:... 0.04 OrthoFinder output from all 47 species
GSVIVT01015018001 ATSUS4, SUS4 Carbohydrate metabolism.sucrose... 0.04 OrthoFinder output from all 47 species
GSVIVT01035106001 SSA, ATSUS2, SUS2 Carbohydrate metabolism.sucrose... 0.02 OrthoFinder output from all 47 species
Gb_12813 ATSUS3, SUS3 Sucrose synthase 4 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os03g28330.4 ATSUS4, SUS4,... sucrose synthase 0.02 OrthoFinder output from all 47 species
LOC_Os07g42490.1 ATSUS4, SUS4,... sucrose synthase 0.03 OrthoFinder output from all 47 species
Len_g03876 ATSUS3, SUS3 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
MA_123269g0010 ATSUS3, SUS3 sucrose synthase 0.02 OrthoFinder output from all 47 species
Ore_g08005 ATSUS3, SUS3 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008018 ATSUS3, SUS3 EC_2.4 glycosyltransferase & original description: CDS=272-2773 0.02 OrthoFinder output from all 47 species
Solyc07g042520.4.1 ASUS1, atsus1,... sucrose synthase 0.03 OrthoFinder output from all 47 species
Solyc12g009300.3.1 ATSUS4, SUS4,... sucrose synthase 0.03 OrthoFinder output from all 47 species
Spa_g15194 ATSUS3, SUS3 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000368 Sucrose_synth 9 569
IPR001296 Glyco_trans_1 577 753
No external refs found!