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  5. Sam_g15927

Sam_g15927


Description : TCX/CPP-type transcription factor & original description: none


Gene families : OG0001700 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001700_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g15927

Target Alias Description ECC score Gene Family Method Actions
Als_g14241 TSO1, ATTSO1 TCX/CPP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene42164.t1 TCX2, ATTCX2,... TCX/CPP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G109700.1 SOL1, Ceric.02G109700 TCX/CPP-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cre12.g550250 TCX2, ATTCX2 RNA biosynthesis.transcriptional activation.CPP1-like... 0.01 OrthoFinder output from all 47 species
LOC_Os12g41230.2 TCX2, ATTCX2,... CPP1-like transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004668 protein-arginine deiminase activity IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
BP GO:0009445 putrescine metabolic process IEP HCCA
BP GO:0009446 putrescine biosynthetic process IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005172 CRC 94 129
IPR005172 CRC 19 42
No external refs found!