Sam_g15938


Description : not classified & original description: none


Gene families : OG0004676 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004676_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g15938

Target Alias Description ECC score Gene Family Method Actions
AT4G26860 No alias Predicted pyridoxal phosphate-dependent enzyme, YBL036C type 0.08 OrthoFinder output from all 47 species
Azfi_s0129.g048943 No alias A1-class (Pepsin) protease & original description: CDS=237-881 0.05 OrthoFinder output from all 47 species
Cre01.g010848 No alias No description available 0.03 OrthoFinder output from all 47 species
Dde_g12636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03148 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_20010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g72205.1 LOC_Os01g72205 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g07283 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Mp1g12520.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Smo83798 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc10g006240.3.1 Solyc10g006240 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001608 Ala_racemase_N 36 259
No external refs found!