Lfl_g26956 (RPS15A)

Aliases : RPS15A

Description : component *(uS8) of small ribosomal-subunit (SSU) proteome & original description: none

Gene families : OG0001724 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001724_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g26956
Cluster	HCCA: Cluster_47

Target	Alias	Description	ECC score	Gene Family Method
AT5G59850	No alias	Ribosomal protein S8 family protein	0.07	OrthoFinder output from all 47 species
Adi_g053042	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
Ala_g11423	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Ala_g32909	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Als_g39784	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Aop_g23610	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.06	OrthoFinder output from all 47 species
Aspi01Gene41551.t1	RPS15A, Aspi01Gene41551	component *(uS8) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Azfi_s0035.g025499	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Azfi_s0073.g037095	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Azfi_s0078.g038157	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000158.110	RPS15A	Protein biosynthesis.cytosolic ribosome.small subunit...	0.03	OrthoFinder output from all 47 species
Cre05.g234637	RPS15A	Protein biosynthesis.cytosolic ribosome.small subunit...	0.04	OrthoFinder output from all 47 species
GSVIVT01016595001	RPS15A	Protein biosynthesis.cytosolic ribosome.small subunit...	0.04	OrthoFinder output from all 47 species
LOC_Os02g27760.1	RPS15A, LOC_Os02g27760	component RPS15a of SSU proteome	0.05	OrthoFinder output from all 47 species
LOC_Os07g10720.1	RPS15A, LOC_Os07g10720	component RPS15a of SSU proteome	0.06	OrthoFinder output from all 47 species
Len_g25520	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
Mp8g06510.1	RPS15A	component RPS15a of SSU proteome	0.03	OrthoFinder output from all 47 species
Mp8g13010.1	RPS15A	component RPS15a of SSU proteome	0.03	OrthoFinder output from all 47 species
Nbi_g05066	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Pir_g01095	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Pp3c1_4290V3.1	RPS15A, Pp3c1_4290	Ribosomal protein S8 family protein	0.03	OrthoFinder output from all 47 species
Pp3c2_32050V3.1	RPS15A, Pp3c2_32050	Ribosomal protein S8 family protein	0.02	OrthoFinder output from all 47 species
Pp3c3_1140V3.1	RPS15A, Pp3c3_1140	ribosomal protein S15A	0.01	OrthoFinder output from all 47 species
Pp3c4_27540V3.1	RPS15A, Pp3c4_27540	Ribosomal protein S8 family protein	0.03	OrthoFinder output from all 47 species
Ppi_g37999	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
Ppi_g61636	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
Smo228163	RPS15A	Protein biosynthesis.cytosolic ribosome.small subunit...	0.04	OrthoFinder output from all 47 species
Solyc04g150158.1.1	RPS15A, Solyc04g150158	component RPS15a of SSU proteome	0.06	OrthoFinder output from all 47 species
Spa_g17843	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.06	OrthoFinder output from all 47 species
Spa_g17844	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Spa_g29032	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.06	OrthoFinder output from all 47 species
Zm00001e016394_P001	RPS15A, Zm00001e016394	component RPS15a of SSU proteome	0.05	OrthoFinder output from all 47 species
Zm00001e026115_P001	RPS15A, Zm00001e026115	component RPS15a of SSU proteome	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004478	methionine adenosyltransferase activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
BP	GO:0006556	S-adenosylmethionine biosynthetic process	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0044272	sulfur compound biosynthetic process	IEP	HCCA
BP	GO:0046500	S-adenosylmethionine metabolic process	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
MF	GO:0061630	ubiquitin protein ligase activity	IEP	HCCA
MF	GO:0061659	ubiquitin-like protein ligase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000630	Ribosomal_S8	32	152

External Links

No external refs found!

Lfl_g26956 (RPS15A)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation