Sam_g16185


Description : not classified & original description: none


Gene families : OG0000315 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16185

Target Alias Description ECC score Gene Family Method Actions
AT4G19700 RING SBP (S-ribonuclease binding protein) family protein 0.02 OrthoFinder output from all 47 species
Adi_g005621 RING not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g105724 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117545 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13061 SBP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g26304 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g08650 SBP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00571 SBP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07549 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_07205 SBP1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g35290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20258 SBP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023032 No alias not classified & original description: CDS=75-1241 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s1929.g028221 SBP1 not classified & original description: CDS=384-1451 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006743 ubiquinone metabolic process IEP HCCA
BP GO:0006744 ubiquinone biosynthetic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0042180 cellular ketone metabolic process IEP HCCA
BP GO:0042181 ketone biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901661 quinone metabolic process IEP HCCA
BP GO:1901663 quinone biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!