Sam_g16248


Description : not classified & original description: none


Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16248

Target Alias Description ECC score Gene Family Method Actions
Als_g12395 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0109.g045336 No alias pectin methylesterase & original description: CDS=343-1428 0.03 OrthoFinder output from all 47 species
Ceric.11G006900.1 Ceric.11G006900 pectin methylesterase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.13G037500.1 Ceric.13G037500 pectin methylesterase & original description:... 0.02 OrthoFinder output from all 47 species
Lfl_g09832 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g40175 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32792 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38524 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020122 No alias not classified & original description: CDS=269-877 0.03 OrthoFinder output from all 47 species
Sam_g10266 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g44288 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g49832 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Smo101090 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
Spa_g11007 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49578 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!