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  5. Sam_g16359

Sam_g16359


Description : not classified & original description: none


Gene families : OG0000025 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16359
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Adi_g033431 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g038107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g041250 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g100295 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g35516 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g43238 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g44841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g47342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48462 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g17541 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g37805 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g15111 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g24375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10366.t1 Aspi01Gene10366 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene11246.t1 Aspi01Gene11246 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21494.t1 Aspi01Gene21494 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22749.t1 Aspi01Gene22749 LON-type protease & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene22838.t1 Aspi01Gene22838 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47823.t1 Aspi01Gene47823 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene50474.t1 Aspi01Gene50474 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene51439.t1 Aspi01Gene51439 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene52469.t1 Aspi01Gene52469 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54468.t1 Aspi01Gene54468 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55002.t1 Aspi01Gene55002 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64050.t1 Aspi01Gene64050 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene69305.t2 Aspi01Gene69305 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000141 No alias not classified & original description: CDS=1-1008 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011299 No alias not classified & original description: CDS=1-195 0.03 OrthoFinder output from all 47 species
Azfi_s0026.g023395 No alias not classified & original description: CDS=1-396 0.03 OrthoFinder output from all 47 species
Cba_g10214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g68822 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g76728 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g01950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11730 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g14318 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g33280 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g26782 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g48774 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g49203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g41265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g55021 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g39871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g36233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g26909 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58665 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g60397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61123 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65818 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g26293 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g26401 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g31196 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53648 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28937 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g57222 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g28265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP HCCA
InterPro domains Description Start Stop
IPR026960 RVT-Znf 332 394
No external refs found!