Sam_g16371


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16371
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00153950 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.04 OrthoFinder output from all 47 species
AMTR_s00041p00129840 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g32430,... 0.04 OrthoFinder output from all 47 species
AMTR_s00077p00166950 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g14730... 0.02 OrthoFinder output from all 47 species
Adi_g004364 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g004502 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g099216 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05438 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g34145 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g06600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08715 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16840 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17262 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17623 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g19009 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g33302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06903 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26985 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27561 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30469 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20910 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67878 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02296.t1 Aspi01Gene02296 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07235.t1 REME1, Aspi01Gene07235 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene60948.t1 OTP84, Aspi01Gene60948 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61369.t1 CRR22, Aspi01Gene61369 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29524 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g32521 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34428 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34536 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g37586 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g77657 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.19G003900.1 Ceric.19G003900 not classified & original description: pacid=50575192... 0.02 OrthoFinder output from all 47 species
Dac_g25154 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g23959 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47718 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09826 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15886 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g26041 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26344 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28512 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g35433 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06009 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12271 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009574001 OSB1 Cell cycle.organelle machineries.DNA... 0.04 OrthoFinder output from all 47 species
Gb_02573 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Gb_11981 REME1 Pentatricopeptide repeat-containing protein At3g24000,... 0.04 OrthoFinder output from all 47 species
LOC_Os02g49830.1 LOC_Os02g49830 Pentatricopeptide repeat-containing protein At3g22690... 0.05 OrthoFinder output from all 47 species
LOC_Os04g09530.1 LOC_Os04g09530 RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species
LOC_Os06g47920.1 LOC_Os06g47920 Pentatricopeptide repeat-containing protein At5g44230... 0.02 OrthoFinder output from all 47 species
Len_g03869 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g17732 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g19007 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g26318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g54669 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04822 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40602 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_112849g0010 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.02 OrthoFinder output from all 47 species
MA_131437g0010 No alias RNA editing factor (MEF3) 0.03 OrthoFinder output from all 47 species
MA_785826g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Msp_g03575 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07777 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28794 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10208 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g13676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25357 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29069 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g35296 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g39379 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22943 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06149 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06887 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06977 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11096 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18475 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g29582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62885 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000505 CRR2 not classified & original description: CDS=1-1110 0.02 OrthoFinder output from all 47 species
Sam_g12246 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g12540 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo111982 No alias Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
Smo34638 REME1 Pentatricopeptide repeat-containing protein At2g03880,... 0.03 OrthoFinder output from all 47 species
Smo77659 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Solyc01g100800.2.1 Solyc01g100800 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Solyc02g068630.1.1 Solyc02g068630 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc03g063690.1.1 MEF1, Solyc03g063690 RNA editing factor (MEF1) 0.02 OrthoFinder output from all 47 species
Solyc06g053850.4.1 Solyc06g053850 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Spa_g14009 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14725 MEF21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20734 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g27468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33897 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06622 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g11187 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g24133 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g41566 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011923_P001 Zm00001e011923 Pentatricopeptide repeat-containing protein At4g21300... 0.03 OrthoFinder output from all 47 species
Zm00001e031693_P001 Zm00001e031693 Pentatricopeptide repeat-containing protein At4g14050,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!