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  5. Sam_g16458

Sam_g16458


Description : magnesium dechelatase *(SGR) & original description: none


Gene families : OG0001394 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001394_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16458
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AT4G11911 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.02 OrthoFinder output from all 47 species
Adi_g104442 NYE1, ATNYE1 magnesium dechelatase *(SGR) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12105 NYE1, ATNYE1 magnesium dechelatase *(SGR) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23552 NYE1, ATNYE1 magnesium dechelatase *(SGR) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20326 No alias magnesium dechelatase *(SGR) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05133 NYE1, ATNYE1 magnesium dechelatase *(SGR) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.25G023100.1 NYE1, ATNYE1,... magnesium dechelatase *(SGR) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.25G023400.1 NYE1, ATNYE1,... magnesium dechelatase *(SGR) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.25G023600.1 NYE1, ATNYE1,... magnesium dechelatase *(SGR) & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g35434 NYE1, ATNYE1 magnesium dechelatase *(SGR) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g35558 No alias magnesium dechelatase *(SGR) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g05512 No alias magnesium dechelatase *(SGR) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008768001 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.04 OrthoFinder output from all 47 species
LOC_Os09g36200.1 NYE1, ATNYE1,... magnesium dechelatase 0.02 OrthoFinder output from all 47 species
Lfl_g08879 No alias magnesium dechelatase *(SGR) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g22318 No alias magnesium dechelatase *(SGR) & original description: none 0.02 OrthoFinder output from all 47 species
MA_72094g0010 NYE1, ATNYE1 magnesium dechelatase 0.02 OrthoFinder output from all 47 species
Nbi_g11383 No alias magnesium dechelatase *(SGR) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g22200 No alias magnesium dechelatase *(SGR) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g34485 No alias magnesium dechelatase *(SGR) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g63834 NYE1, ATNYE1 magnesium dechelatase *(SGR) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008118 No alias magnesium dechelatase *(SGR) & original description: CDS=341-1285 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012432 No alias magnesium dechelatase *(SGR) & original description: CDS=78-809 0.04 OrthoFinder output from all 47 species
Spa_g17751 No alias magnesium dechelatase *(SGR) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26026 No alias magnesium dechelatase *(SGR) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49854 No alias magnesium dechelatase *(SGR) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004615 phosphomannomutase activity IEP HCCA
BP GO:0009225 nucleotide-sugar metabolic process IEP HCCA
BP GO:0009226 nucleotide-sugar biosynthetic process IEP HCCA
BP GO:0009298 GDP-mannose biosynthetic process IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
BP GO:0019673 GDP-mannose metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR024438 Staygreen 111 247
No external refs found!