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  5. Sam_g16828

Sam_g16828


Description : not classified & original description: none


Gene families : OG0001589 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001589_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16828

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00050p00180490 evm_27.TU.AmTr_v1... Acyl-CoA-binding domain-containing protein 4... 0.02 OrthoFinder output from all 47 species
AMTR_s00057p00182130 evm_27.TU.AmTr_v1... Acyl-CoA-binding domain-containing protein 6 OS=Oryza... 0.03 OrthoFinder output from all 47 species
Aspi01Gene54901.t1 Aspi01Gene54901 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19682 ACBP4 acyl-CoA-binding protein *(ACBP4/5) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016168001 No alias Acyl-CoA-binding domain-containing protein 4... 0.03 OrthoFinder output from all 47 species
GSVIVT01017784001 No alias Acyl-CoA-binding domain-containing protein 6 OS=Oryza... 0.02 OrthoFinder output from all 47 species
MA_110299g0010 No alias Acyl-CoA-binding domain-containing protein 6 OS=Oryza... 0.02 OrthoFinder output from all 47 species
MA_447541g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp8g10800.1 No alias Acyl-CoA-binding domain-containing protein 6 OS=Oryza... 0.02 OrthoFinder output from all 47 species
Ppi_g29375 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g067480.4.1 Solyc01g067480 Acyl-CoA-binding domain-containing protein 6 OS=Oryza... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0042575 DNA polymerase complex IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
CC GO:0043625 delta DNA polymerase complex IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP HCCA
BP GO:0046855 inositol phosphate dephosphorylation IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071545 inositol phosphate catabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 96 137
No external refs found!