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  5. Sam_g16874

Sam_g16874


Description : not classified & original description: none


Gene families : OG0000334 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000334_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16874

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00133560 ATYSL3, YSL3,... Solute transport.carrier-mediated transport.OPT... 0.02 OrthoFinder output from all 47 species
AT5G53550 ATYSL3, YSL3 YELLOW STRIPE like 3 0.02 OrthoFinder output from all 47 species
Als_g03162 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.04 OrthoFinder output from all 47 species
Als_g11252 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene29925.t4 YSL6, Aspi01Gene29925 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0280.g062272 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.04 OrthoFinder output from all 47 species
Cba_g43884 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01012035001 YSL7 Nutrient uptake.iron uptake.chelation-based strategy... 0.02 OrthoFinder output from all 47 species
LOC_Os04g44320.1 YSL7, LOC_Os04g44320 iron chelator transporter (YSL). ferric cation-chelator... 0.01 OrthoFinder output from all 47 species
Len_g03356 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Len_g41418 YSL6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g50927 YSL7 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g04128 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Msp_g09049 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Msp_g09197 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.05 OrthoFinder output from all 47 species
Nbi_g01196 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Ore_g29507 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Pir_g07859 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Pir_g52006 YSL6 iron chelator transporter *(YSL) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g52007 YSL6 iron chelator transporter *(YSL) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g52008 YSL7 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g15427 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g55416 YSL7 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Sam_g03737 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g21998 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g24335 No alias iron chelator transporter *(YSL) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30797 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g44565 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g49416 No alias iron chelator transporter *(YSL) & original description: none 0.04 OrthoFinder output from all 47 species
Smo269976 YSL6 Nutrient uptake.iron uptake.chelation-based strategy... 0.03 OrthoFinder output from all 47 species
Spa_g41382 ATYSL1, YSL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51129 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e007378_P004 ATYSL2, YSL2,... iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
Zm00001e008356_P001 YSL6, Zm00001e008356 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
Zm00001e025368_P001 YSL7, Zm00001e025368 iron chelator transporter (YSL). ferric cation-chelator... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035673 oligopeptide transmembrane transporter activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004813 OPT 7 94
No external refs found!