Sam_g17100

Description : not classified & original description: none

Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g17100

Target	Alias	Description	ECC score	Gene Family Method
Adi_g102739	No alias	RING-H2-class BTL-subclass E3 ubiquitin ligase &...	0.02	OrthoFinder output from all 47 species
Ala_g21468	No alias	RING-H2-class BTL-subclass E3 ubiquitin ligase &...	0.02	OrthoFinder output from all 47 species
LOC_Os01g44240.1	LOC_Os01g44240	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_77269g0010	No alias	E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Zm00001e028905_P001	RHC1A, Zm00001e028905	Probable E3 ubiquitin-protein ligase RHC1A...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	IEA	Interproscan
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	198	241
IPR039525	RNF126-like_zinc-ribbon	11	41

External Links

No external refs found!