Description : protease *(Deg) & original description: none
Gene families : OG0000904 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000904_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sam_g17213 | |
| Cluster | HCCA: Cluster_115 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aob_g01823 | DEGP1, Deg1 | protease *(Deg) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g20921 | DEGP1, Deg1 | protease *(Deg) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g16953 | DEGP8, DEG8 | protease *(Deg) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.05G006700.1 | DEGP1, Deg1,... | not classified & original description: pacid=50578290... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.05G006800.1 | DEGP1, Deg1,... | protease *(Deg) & original description: pacid=50577199... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g13519 | DEGP8, DEG8 | protease *(Deg) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g30398 | DEGP1, Deg1 | protease *(Deg) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g02769 | DEGP1, Deg1 | protease *(Deg) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01011396001 | DEGP8, DEG8 | Protein degradation.peptidase families.serine-type... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_28169 | DEGP1, Deg1 | protease (Deg) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_28170 | DEGP1, Deg1 | protease (Deg) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g01244 | DEGP1, Deg1 | protease *(Deg) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g04692 | DEGP8, DEG8 | protease *(Deg) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g02003 | DEGP1, Deg1 | protease *(Deg) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g04654 | DEGP8, DEG8 | protease *(Deg) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g15801 | DEGP1, Deg1 | protease *(Deg) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10431940g0010 | DEGP1, Deg1 | protease (Deg) | 0.04 | OrthoFinder output from all 47 species | |
| Mp7g10590.1 | DEGP1, Deg1 | protease (Deg) | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g09508 | DEGP8, DEG8 | protease *(Deg) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g04085 | DEGP8, DEG8 | protease *(Deg) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g06849 | DEGP1, Deg1 | protease *(Deg) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g30348 | DEGP8, DEG8 | protease *(Deg) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0030.g010314 | DEGP1, Deg1 | protease *(Deg) & original description: CDS=1-1440 | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g09562 | DEGP8, DEG8 | protease *(Deg) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g05081 | DEGP8, DEG8 | protease *(Deg) & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006400 | tRNA modification | IEP | HCCA |
| BP | GO:0006605 | protein targeting | IEP | HCCA |
| BP | GO:0006612 | protein targeting to membrane | IEP | HCCA |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | HCCA |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008176 | tRNA (guanine-N7-)-methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | HCCA |
| MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0045047 | protein targeting to ER | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051668 | localization within membrane | IEP | HCCA |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0072657 | protein localization to membrane | IEP | HCCA |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001478 | PDZ | 367 | 462 |
| No external refs found! |
