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  5. Sam_g17319

Sam_g17319


Description : not classified & original description: none


Gene families : OG0000006 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g17319

Target Alias Description ECC score Gene Family Method Actions
Ala_g28538 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g31193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18563 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19085.t1 Aspi01Gene19085 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19143.t1 Aspi01Gene19143 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61548.t1 Aspi01Gene61548 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69220.t1 Aspi01Gene69220 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0008.g011274 No alias not classified & original description: CDS=1-747 0.03 OrthoFinder output from all 47 species
Cba_g00826 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g01601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g77151 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01804 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g30550 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g31450 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_13118 HY4, ATCRY1,... cryptochrome photoreceptor (CRY) 0.04 OrthoFinder output from all 47 species
Nbi_g23441 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g30605 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63779 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04851 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001779 No alias not classified & original description: CDS=1-1170 0.04 OrthoFinder output from all 47 species
Sam_g17817 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g20647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48520 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g32539 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009229 thiamine diphosphate biosynthetic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030975 thiamine binding IEP HCCA
CC GO:0034457 Mpp10 complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042357 thiamine diphosphate metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043178 alcohol binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000477 RT_dom 124 204
No external refs found!