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  5. Sam_g17420

Sam_g17420


Description : calcium sensor *(CML) & original description: none


Gene families : OG0000205 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000205_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g17420

Target Alias Description ECC score Gene Family Method Actions
AT2G43290 MSS3 Calcium-binding EF-hand family protein 0.02 OrthoFinder output from all 47 species
AT5G44460 CML43 calmodulin like 43 0.02 OrthoFinder output from all 47 species
Aev_g02133 AGD11 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12844 CML42 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g43890 AGD11 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03940 UNE14 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene57526.t1 CML43, Aspi01Gene57526 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15896 AGD11 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.17G067100.1 CML43, Ceric.17G067100 calcium sensor *(CML) & original description:... 0.04 OrthoFinder output from all 47 species
Gb_13868 CML43 Probable calcium-binding protein CML43 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp6g20440.1 CML42 Probable calcium-binding protein CML22 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Pir_g65072 UNE14 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09124 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g03755 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g33330 No alias calcium sensor *(CML) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g33279 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e010984_P001 CML42, Zm00001e010984 Probable calcium-binding protein CML32 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Zm00001e038252_P001 CML43, Zm00001e038252 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004629 phospholipase C activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 144 208
IPR002048 EF_hand_dom 45 106
No external refs found!