Sam_g17475

Description : not classified & original description: none

Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g17475

Target	Alias	Description	ECC score	Gene Family Method
AT3G13100	ABCC7, ATMRP7, MRP7	multidrug resistance-associated protein 7	0.03	OrthoFinder output from all 47 species
AT3G59140	ATMRP14, ABCC10, MRP14	multidrug resistance-associated protein 14	0.03	OrthoFinder output from all 47 species
Adi_g056548	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g25843	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Als_g22920	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene25301.t1	MRP6, ATMRP6,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene45964.t1	ATABCC5, MRP5,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.23G061900.1	ABCC1, ATABCC1,...	subfamily ABCC transporter & original description:...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000718.1	AtABCC2, ABCC2,...	ABC transporter C family member 2 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020553.190	ATABCC5, MRP5,...	ABC transporter C family member 4 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020553.191	ATMRP12, MRP12, ABCC11	ABC transporter C family member 11 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020592.4	ATMRP12, MRP12, ABCC11	ABC transporter C family member 1 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Dac_g15072	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g26836	MRP11, ABCC13, ATMRP11	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Gb_05522	MRP9, ABCC9, ATMRP9	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species
LOC_Os11g05700.1	ATMRP14, ABCC10,...	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species
Lfl_g32964	ATABCC5, MRP5,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_10431617g0010	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species
MA_10436190g0020	ATMRP14, ABCC10, MRP14	ABC transporter C family member 10 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_10436190g0030	ATMRP14, ABCC10, MRP14	ABC transporter C family member 10 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_10436190g0040	ATMRP14, ABCC10, MRP14	ABC transporter C family member 10 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_11781g0010	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species
MA_602830g0010	ATMRP14, ABCC10, MRP14	ABC transporter C family member 10 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_629244g0010	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species
Mp4g11790.1	MRP11, ABCC13, ATMRP11	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species
Mp5g13230.1	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species
Sam_g04646	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g17498	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g23741	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Sam_g27892	No alias	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Smo417771	ATMRP12, MRP12, ABCC11	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Spa_g20006	EST3, MRP4, ATMRP4, ABCC4	not classified & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	11	129

External Links

No external refs found!

Sam_g17475

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation