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  5. Sam_g17499

Sam_g17499


Description : not classified & original description: none


Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g17499

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00218350 MRP10, ATMRP10,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AT3G13090 ATMRP8, MRP8, ABCC6 multidrug resistance-associated protein 8 0.02 OrthoFinder output from all 47 species
AT3G13100 ABCC7, ATMRP7, MRP7 multidrug resistance-associated protein 7 0.03 OrthoFinder output from all 47 species
Ala_g27220 ABCC12, MRP13, ATMRP13 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28342 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g11934 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene04344.t1 MRP6, ATMRP6,... subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64348.t1 ABCC1, ATABCC1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07587 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.23G061900.1 ABCC1, ATABCC1,... subfamily ABCC transporter & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g08766 AtABCC2, ABCC2,... subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g15072 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26836 MRP11, ABCC13, ATMRP11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01014628001 ABCC3, ATMRP3, MRP3 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01019475001 ATMRP14, ABCC10, MRP14 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Gb_35586 ATABCC5, MRP5,... subfamily ABCC transporter 0.04 OrthoFinder output from all 47 species
MA_10431617g0010 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter 0.02 OrthoFinder output from all 47 species
MA_11781g0010 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter 0.02 OrthoFinder output from all 47 species
MA_11781g0020 MRP6, ATMRP6, ABCC8 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp5g13220.1 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter 0.04 OrthoFinder output from all 47 species
Mp5g13230.1 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter 0.04 OrthoFinder output from all 47 species
Msp_g14759 MRP9, ABCC9, ATMRP9 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017297 ATMRP12, MRP12, ABCC11 subfamily ABCC transporter & original description: CDS=111-3830 0.02 OrthoFinder output from all 47 species
Sam_g17500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo163776 ATABCC5, MRP5,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo417771 ATMRP12, MRP12, ABCC11 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 11 161
No external refs found!