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  5. Sam_g17500

Sam_g17500


Description : not classified & original description: none


Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g17500
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
Adi_g000264 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g005782 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g007701 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g073265 MRP6, ATMRP6, ABCC8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g04895 AtABCC2, ABCC2,... glutathione S-conjugate transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11720 ATMRP14, ABCC10, MRP14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42759 MRP6, ATMRP6, ABCC8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g47598 ATMRP14, ABCC10, MRP14 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17286 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene04340.t1 MRP6, ATMRP6,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene05224.t1 ATMRP12, MRP12,... subfamily ABCC transporter & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene05228.t1 AtABCC2, ABCC2,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene26287.t1 EST3, MRP4,... subfamily ABCC transporter & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene26415.t1 EST3, MRP4,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29535.t1 MRP10, ATMRP10,... subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33255.t1 EST3, MRP4,... subfamily ABCC transporter & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene43479.t1 AtABCC2, ABCC2,... glutathione S-conjugate transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45964.t1 ATABCC5, MRP5,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45971.t2 MRP6, ATMRP6,... subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64349.t1 AtABCC2, ABCC2,... glutathione S-conjugate transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64352.t2 AtABCC2, ABCC2,... glutathione S-conjugate transporter & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g01336 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g06904 AtABCC2, ABCC2,... glutathione S-conjugate transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24925 MRP10, ATMRP10, ABCC14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g44465 EST3, MRP4, ATMRP4, ABCC4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g49210 ABCC12, MRP13, ATMRP13 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Gb_17216 ATMRP14, ABCC10, MRP14 ABC transporter C family member 10 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_20972 ATMRP14, ABCC10, MRP14 ABC transporter C family member 10 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_23689 ATMRP14, ABCC10, MRP14 ABC transporter C family member 10 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_24588 ATMRP14, ABCC10, MRP14 ABC transporter C family member 10 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g14395 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g19144 MRP6, ATMRP6, ABCC8 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g39940 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ppi_g12667 AtABCC2, ABCC2,... glutathione S-conjugate transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15560 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 2 115
No external refs found!