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  5. Sam_g17848

Sam_g17848


Description : component *(eL29) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0004690 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004690_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g17848

Target Alias Description ECC score Gene Family Method Actions
AT3G06680 No alias Ribosomal L29e protein family 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g007916 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.11 OrthoFinder output from all 47 species
Azfi_s0095.g043647 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Cba_g68190 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ceric.39G032900.1 Ceric.39G032900 component *(eL29) of large ribosomal-subunit (LSU)... 0.1 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000269.24 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Cre03.g207050 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 OrthoFinder output from all 47 species
GSVIVT01035023001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Gb_37735 No alias component RPL29 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Len_g34825 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Mp1g23580.1 No alias component RPL29 of LSU proteome component 0.06 OrthoFinder output from all 47 species
Pp3c14_7570V3.1 Pp3c14_7570 Ribosomal L29e protein family 0.01 OrthoFinder output from all 47 species
Pp3c1_34380V3.1 Pp3c1_34380 Ribosomal L29e protein family 0.01 OrthoFinder output from all 47 species
Smo228166 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Spa_g43144 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR002673 Ribosomal_L29e 71 110
No external refs found!