Description : not classified & original description: none
Gene families : OG0001009 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001009_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sam_g18106 | |
| Cluster | HCCA: Cluster_115 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Als_g11722 | ALS3 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.34G042600.1 | ALS3, Ceric.34G042600 | not classified & original description: pacid=50622744... | 0.02 | OrthoFinder output from all 47 species | |
| Cre16.g673000 | ALS3 | UPF0014 membrane protein STAR2 OS=Oryza sativa subsp. japonica | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g29545 | ALS3 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g22075 | ALS3 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0031.g010613 | ALS3 | not classified & original description: CDS=180-1157 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0078.g017676 | No alias | not classified & original description: CDS=250-1122 | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004519 | endonuclease activity | IEP | HCCA |
| MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
| MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| BP | GO:0006766 | vitamin metabolic process | IEP | HCCA |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | HCCA |
| BP | GO:0006771 | riboflavin metabolic process | IEP | HCCA |
| MF | GO:0008703 | 5-amino-6-(5-phosphoribosylamino)uracil reductase activity | IEP | HCCA |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | HCCA |
| BP | GO:0009231 | riboflavin biosynthetic process | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
| MF | GO:0016881 | acid-amino acid ligase activity | IEP | HCCA |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | HCCA |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | HCCA |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | HCCA |
| BP | GO:0042726 | flavin-containing compound metabolic process | IEP | HCCA |
| BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005226 | UPF0014_fam | 99 | 329 |
| No external refs found! |
