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  5. Sam_g18108

Sam_g18108


Description : not classified & original description: none


Gene families : OG0002270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002270_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g18108
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene64653.t1 Aspi01Gene64653 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os09g19890.1 LOC_Os09g19890 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g52178 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g25187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001644 No alias not classified & original description: CDS=1-1701 0.04 OrthoFinder output from all 47 species
Spa_g12648 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!