Sam_g18303


Description : not classified & original description: none


Gene families : OG0000041 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g18303
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00244960 HSP18.2,... 18.1 kDa class I heat shock protein OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00146p00035150 HSP17.6II,... External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
Adi_g023209 HSP18.2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g050615 HSP17.6A,... class-C-II small heat-shock-responsive protein &... 0.02 OrthoFinder output from all 47 species
Aev_g33179 ATHSP17.4, HSP17.4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g39397 HSP18.2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g45712 HSP18.2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51401 HSP18.2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09997 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18752.t1 HSP18.2, Aspi01Gene18752 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g007525 No alias not classified & original description: CDS=93-1037 0.01 OrthoFinder output from all 47 species
Azfi_s0446.g070658 HSP18.2 not classified & original description: CDS=359-871 0.05 OrthoFinder output from all 47 species
Azfi_s0446.g070663 HSP18.2 not classified & original description: CDS=335-853 0.03 OrthoFinder output from all 47 species
Ceric.01G042300.1 Ceric.01G042300 not classified & original description: pacid=50592511... 0.05 OrthoFinder output from all 47 species
Ceric.05G086800.1 Ceric.05G086800 not classified & original description: pacid=50577531... 0.03 OrthoFinder output from all 47 species
Ceric.16G030000.1 HSP18.2, Ceric.16G030000 not classified & original description: pacid=50589114... 0.02 OrthoFinder output from all 47 species
Ceric.17G067700.1 ATHSP17.4,... not classified & original description: pacid=50618365... 0.03 OrthoFinder output from all 47 species
Ceric.36G011800.1 Ceric.36G011800 not classified & original description: pacid=50569195... 0.02 OrthoFinder output from all 47 species
Ceric.36G025900.1 HSP18.2, Ceric.36G025900 not classified & original description: pacid=50568453... 0.04 OrthoFinder output from all 47 species
Dac_g10910 HSP18.2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g09714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g15693 ATHSP17.4, HSP17.4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g51145 HSP18.2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31024 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013663001 ATHSP17.4, HSP17.4 17.4 kDa class I heat shock protein OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Len_g29387 ATHSP17.4, HSP17.4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g22630.1 ATHSP17.4, HSP17.4 17.3 kDa class I heat shock protein OS=Glycine max... 0.01 OrthoFinder output from all 47 species
Nbi_g04583 HSP18.2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g21539 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g00774 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15935 HSP17.6A,... class-C-II small heat-shock-responsive protein &... 0.02 OrthoFinder output from all 47 species
Ore_g39150 HSP17.6II class-C-II small heat-shock-responsive protein &... 0.04 OrthoFinder output from all 47 species
Pir_g15094 HSP18.2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g23199 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g39541 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g086680.1.1 Solyc10g086680 18.2 kDa class I heat shock protein OS=Medicago sativa... 0.02 OrthoFinder output from all 47 species
Spa_g03032 ATHSP17.4, HSP17.4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g13170 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g30660 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g31305 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
InterPro domains Description Start Stop
IPR002068 A-crystallin/Hsp20_dom 65 171
No external refs found!