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  5. Sam_g18318

Sam_g18318


Description : not classified & original description: none


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g18318
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00267240 MYB41, AtMYB41,... RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder output from all 47 species
AMTR_s00009p00257950 AtMYB17, MYB17,... Transcription factor MYB41 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00032p00221670 ATY53, ATMYB67,... RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
AMTR_s00039p00172240 AtMYB79, MYB79,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AT1G08810 MYB60, AtMYB60 myb domain protein 60 0.02 OrthoFinder output from all 47 species
AT1G66390 PAP2, ATMYB90, MYB90 myb domain protein 90 0.02 OrthoFinder output from all 47 species
AT2G16720 MYB7, ATY49, ATMYB7 myb domain protein 7 0.02 OrthoFinder output from all 47 species
AT2G47460 ATMYB12, PFG1, MYB12 myb domain protein 12 0.02 OrthoFinder output from all 47 species
AT4G21440 ATMYB102, ATM4, MYB102 MYB-like 102 0.03 OrthoFinder output from all 47 species
Aev_g02354 AtMYB50, MYB50 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12369 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13874 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18634 AtMYB79, MYB79 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g26100 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28345.t1 AtMYB50, MYB50,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene43211.t1 MYB86, ATMYB86,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44160.t1 MYB86, ATMYB86,... MYB class-R2R3 subgroup-13 transcription factor &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene61787.t1 AtMYB85, MYB85,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67215.t1 ATMIXTA, MYB16,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67215.t2 ATMIXTA, MYB16,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0129.g048859 AtMYB107, MYB107 not classified & original description: CDS=183-1736 0.02 OrthoFinder output from all 47 species
Ceric.17G059200.1 ATMYB61, MYB61,... not classified & original description: pacid=50617474... 0.03 OrthoFinder output from all 47 species
Dac_g32298 MYB19, AtMYB19 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g21726 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g43510 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01004851001 AtMYB93, MYB93 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01007981001 ATMIXTA, MYB16, ATMYB16 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01009032001 AtMYB93, MYB93 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01009280001 MYB84, RAX3, ATMYB84 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01012778001 ATMYB4, MYB4 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01013126001 AtMYB107, MYB107 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01016800001 MYB26, ATMYB26, MS35 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01024353001 AtMYB107, MYB107 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01028981001 AtMYB17, MYB17 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01031341001 ATMYB61, MYB61 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01035177001 AtMYB93, MYB93 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Gb_03400 MYB3, ATMYB3 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Gb_13117 AtMYB93, MYB93 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Gb_22885 ATMYB12, PFG1, MYB12 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Gb_29933 MYB7, ATY49, ATMYB7 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Gb_32143 ATMYB4, MYB4 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os01g50110.1 ATMYB5, MYB5,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os01g51260.1 ATY53, ATMYB67,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os01g74410.1 ATMYB59-1,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os02g41510.1 ATMYB15, ATY19,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os02g54520.1 MYB36, AtMYB36,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os04g50680.1 AtMYB107,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os05g04210.1 BOS1, AtMYB108,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os05g49310.1 ATMYB21, MYB21,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os08g05520.1 MYB103,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os10g33810.1 ATMYB15, ATY19,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os11g35390.1 MYB60, AtMYB60,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_10426901g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_10427849g0010 AtMYB107, MYB107 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_10433651g0010 MYB3, ATMYB3 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_130918g0010 MYB3, ATMYB3 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
MA_136123g0010 MYB3, ATMYB3 transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
MA_173523g0010 AtMYB17, MYB17 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_21440g0010 MYB3, ATMYB3 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
MA_24271g0020 AtMYB93, MYB93 transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
MA_246142g0010 ATMYB4, MYB4 transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
MA_30848g0010 AtMYB79, MYB79 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_31666g0010 ATMYB4, MYB4 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_3665g0010 MYB86, ATMYB86 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_53373g0010 ATMYB5, MYB5 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
MA_8464929g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_95012g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_95747g0010 AtMYB17, MYB17 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_9818613g0010 MYB3, ATMYB3 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Mp4g21300.1 AtMYB40, MYB40 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Mp5g19050.1 MYB6, AtMYB6 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Msp_g09299 AtMYB17, MYB17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03637 ATY53, ATMYB67, MYB67 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15931 AtMYB50, MYB50 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g03861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g34700 No alias MYB class-R2R3 transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g111500.3.1 ATMYB4, MYB4,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc02g079280.3.1 ATMYB102, ATM4,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Solyc03g025870.3.1 MYB19, AtMYB19,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc03g116100.3.1 MYBCOV1, MYB96,... transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
Solyc04g077260.3.1 MYB36, AtMYB36,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc06g075660.4.1 ATMYB48-1,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc07g054840.4.1 ATMYB102, ATM4,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc08g008480.4.1 ATMYB5, MYB5,... transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
Solyc08g076700.1.1 MYB9, AtMYB9,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc08g076710.3.1 MYB9, AtMYB9,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc09g008250.4.1 MYB36, AtMYB36,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc10g044680.2.1 ATMYB61, MYB61,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc10g055410.2.1 ATMYB4, MYB4,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc10g086260.3.1 AtMYB113,... transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
Solyc11g011050.2.1 AtMYB20, MYB20,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc12g099130.2.1 BOS1, AtMYB108,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Spa_g06828 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.02 OrthoFinder output from all 47 species
Spa_g07357 MYB45, AtMYB45 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10427 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g26107 AtMYB50, MYB50 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003407_P001 AtMYB93, MYB93,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e005823_P001 MYB36, AtMYB36,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e009849_P001 MYB36, AtMYB36,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e015884_P001 AtMYB93, MYB93,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Zm00001e016072_P001 MYB36, AtMYB36,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e019941_P001 MYB37, RAX1,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e020004_P001 ATY53, ATMYB67,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e024322_P001 AtMYB93, MYB93,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e029816_P001 MYB9, AtMYB9,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e034214_P001 MYB36, AtMYB36,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e036684_P002 AtMYB107,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e041239_P001 ATMYB15, ATY19,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 15 62
IPR001005 SANT/Myb 68 113
No external refs found!