1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g27197

Lfl_g27197


Description : not classified & original description: none


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g27197
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00105p00074810 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G09740 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g00685 RD2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g37951 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g44724 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g06810 RD2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g37343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69812 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g04989 RD2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G013200.1 Ceric.14G013200 not classified & original description: pacid=50633294... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020685.52 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g26303 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g15798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01028109001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_02091 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_20328 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_32427 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_37404 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g32780.1 LOC_Os01g32780 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g47650.1 RD2, LOC_Os02g47650 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g52314.1 LOC_Os02g52314 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g48312 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g00411 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25076 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g26567 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_11149g0010 No alias Universal stress protein PHOS32 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_32640g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_61335g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp1g02950.1 No alias Universal stress protein PHOS32 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp2g02210.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g17330.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp5g17000.1 RD2 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp6g16930.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g20177 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23590 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43664 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g04955 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g05401 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00265 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48399 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07744 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08782 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g014600.3.1 Solyc04g014600 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g009050.3.1 Solyc06g009050 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g084540.3.1 Solyc06g084540 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g00638 ATPHOS34, PHOS34 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e018234_P001 Zm00001e018234 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e039685_P001 Zm00001e039685 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 5 160
No external refs found!