Sam_g18552


Description : component *(eS17) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001873 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001873_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g18552

Target Alias Description ECC score Gene Family Method Actions
AT3G10610 No alias Ribosomal S17 family protein 0.02 OrthoFinder output from all 47 species
AT5G04800 No alias Ribosomal S17 family protein 0.02 OrthoFinder output from all 47 species
MA_184894g0010 No alias component RPS17 of SSU proteome 0.02 OrthoFinder output from all 47 species
Pir_g57667 No alias component *(eS17) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Solyc05g055230.2.1 Solyc05g055230 component RPS17 of SSU proteome 0.02 OrthoFinder output from all 47 species
Spa_g10597 No alias component *(eS17) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
MF GO:0005548 phospholipid transporter activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0007009 plasma membrane organization IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015914 phospholipid transport IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0017121 plasma membrane phospholipid scrambling IEP HCCA
MF GO:0017128 phospholipid scramblase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0034204 lipid translocation IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0045332 phospholipid translocation IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0097035 regulation of membrane lipid distribution IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140303 intramembrane lipid transporter activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR001210 Ribosomal_S17e 44 162
No external refs found!