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  5. Sam_g18617

Sam_g18617


Description : not classified & original description: none


Gene families : OG0000740 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000740_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g18617
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00247260 iqd17,... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00053p00180370 IQD3,... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT1G01110 IQD18 IQ-domain 18 0.02 OrthoFinder output from all 47 species
AT2G26410 Iqd4 IQ-domain 4 0.02 OrthoFinder output from all 47 species
AT5G03040 iqd2 IQ-domain 2 0.04 OrthoFinder output from all 47 species
Adi_g058759 iqd17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g103411 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g01302 IQD3 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g14167 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23783 IQD6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33731 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g37003 IQD3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g39198 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05140 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g12335 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g32730 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g37610 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17756.t1 IQD3, Aspi01Gene17756 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49314.t1 IQD3, Aspi01Gene49314 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0034.g025364 iqd17 not classified & original description: CDS=155-1645 0.03 OrthoFinder output from all 47 species
Azfi_s0084.g039031 iqd17 not classified & original description: CDS=1-1224 0.04 OrthoFinder output from all 47 species
Azfi_s0190.g056933 IQD14 not classified & original description: CDS=42-1352 0.05 OrthoFinder output from all 47 species
Cba_g08366 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G098100.1 IQD3, Ceric.02G098100 not classified & original description: pacid=50584578... 0.02 OrthoFinder output from all 47 species
Ceric.14G012900.1 IQD6, Ceric.14G012900 not classified & original description: pacid=50633767... 0.03 OrthoFinder output from all 47 species
Ceric.24G079200.1 iqd2, Ceric.24G079200 not classified & original description: pacid=50628687... 0.04 OrthoFinder output from all 47 species
Ceric.29G054200.1 iqd2, Ceric.29G054200 not classified & original description: pacid=50625263... 0.06 OrthoFinder output from all 47 species
Ceric.34G011600.1 IQD3, Ceric.34G011600 not classified & original description: pacid=50623826... 0.04 OrthoFinder output from all 47 species
Ceric.36G050800.1 IQD3, Ceric.36G050800 not classified & original description: pacid=50569109... 0.02 OrthoFinder output from all 47 species
Ceric.39G025000.1 IQD18, Ceric.39G025000 not classified & original description: pacid=50583633... 0.06 OrthoFinder output from all 47 species
Dac_g02287 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01644 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02440 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04615 IQD6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06790 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06944 iqd2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09881 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14991 IQD5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15326 iqd17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016320001 IQD3 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01025635001 IQD3 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01038630001 IQD18 No description available 0.02 OrthoFinder output from all 47 species
Gb_20874 iqd2 microtubule - plasma membrane linkage regulator (IQD13) 0.03 OrthoFinder output from all 47 species
Gb_36296 iqd17 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g03190.1 iqd2, LOC_Os05g03190 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os08g02250.1 iqd17, LOC_Os08g02250 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g04290 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g30913 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g39517 iqd17 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g02292 iqd17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36929 IQD3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_81306g0020 iqd2 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g31509 IQD3 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g32288 IQD3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13108 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13166 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34083 IQD5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g07367 IQD3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g09602 IQD3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g03234 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12855 IQD3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29600 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001853 iqd2 not classified & original description: CDS=1-1665 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014897 IQD3 not classified & original description: CDS=874-2742 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020615 IQD3 not classified & original description: CDS=342-1742 0.02 OrthoFinder output from all 47 species
Sam_g10433 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g10932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo418826 iqd2 No description available 0.02 OrthoFinder output from all 47 species
Smo423607 iqd2 No description available 0.02 OrthoFinder output from all 47 species
Smo438938 IQD3 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo67789 iqd2 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc09g007410.3.1 iqd2, Solyc09g007410 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc10g084280.2.1 IQD3, Solyc10g084280 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc10g086060.2.1 iqd2, Solyc10g086060 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g06887 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07293 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g09001 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30025 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06031 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09399 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10396 IQD3 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g13660 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019382_P001 IQD3, Zm00001e019382 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e021855_P001 iqd17, Zm00001e021855 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e029506_P001 iqd2, Zm00001e029506 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0007265 Ras protein signal transduction IEP HCCA
BP GO:0007266 Rho protein signal transduction IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR025064 DUF4005 426 511
IPR000048 IQ_motif_EF-hand-BS 132 151
No external refs found!