Sam_g18707

Description : NAC-type transcription factor & original description: none

Gene families : OG0000024 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g18707

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00022p00094930	anac078, NAC2,...	RNA biosynthesis.transcriptional activation.NAC...	0.02	OrthoFinder output from all 47 species
Adi_g076585	anac078, NAC2	NAC-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g09261	anac078, NAC2	transcription factor *(ANAC13/17) & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g27578	ATCUC2, ANAC098, CUC2	NAC-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0352.g066622	NAC053, anac053	NAC-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Cba_g58841	anac078, NAC2	NAC-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01026495001	anac103, NAC103	RNA biosynthesis.transcriptional activation.NAC...	0.02	OrthoFinder output from all 47 species
LOC_Os05g35170.1	anac103, NAC103,...	transcription factor (NAC)	0.02	OrthoFinder output from all 47 species
Lfl_g24664	NAC025, anac025	NAC-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_10434139g0010	NAC053, anac053	transcription factor (NAC)	0.03	OrthoFinder output from all 47 species
MA_10437041g0010	anac028, NAC028	transcription factor (NAC)	0.02	OrthoFinder output from all 47 species
Msp_g10186	anac096, NAC096	NAC-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g06779	NAC053, anac053	NAC-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g14910	anac078, NAC2	NAC-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g26893	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Ppi_g43584	anac078, NAC2	NAC-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Solyc03g078120.4.1	anac103, NAC103,...	transcription factor (NAC)	0.01	OrthoFinder output from all 47 species
Solyc11g008000.2.1	NAC053, anac053,...	transcription factor (NAC)	0.02	OrthoFinder output from all 47 species
Spa_g49242	NARS1, NAC2,...	NAC-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	HCCA
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	HCCA
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	HCCA
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	HCCA
CC	GO:0000776	kinetochore	IEP	HCCA
MF	GO:0003916	DNA topoisomerase activity	IEP	HCCA
MF	GO:0003917	DNA topoisomerase type I (single strand cut, ATP-independent) activity	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
CC	GO:0005795	Golgi stack	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006265	DNA topological change	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0006720	isoprenoid metabolic process	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
BP	GO:0008299	isoprenoid biosynthetic process	IEP	HCCA
MF	GO:0008375	acetylglucosaminyltransferase activity	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
MF	GO:0008455	alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0016160	amylase activity	IEP	HCCA
MF	GO:0016161	beta-amylase activity	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
CC	GO:0030684	preribosome	IEP	HCCA
CC	GO:0030688	preribosome, small subunit precursor	IEP	HCCA
CC	GO:0031984	organelle subcompartment	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034508	centromere complex assembly	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0065004	protein-DNA complex assembly	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0071824	protein-DNA complex subunit organization	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
CC	GO:0098791	Golgi apparatus subcompartment	IEP	HCCA
CC	GO:0099080	supramolecular complex	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140103	catalytic activity, acting on a glycoprotein	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	7	133

External Links

No external refs found!

Sam_g18707

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation