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  5. Sam_g19211

Sam_g19211


Description : not classified & original description: none


Gene families : OG0002274 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002274_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g19211

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00024940 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
Ala_g16803 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g13932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21147.t1 Aspi01Gene21147 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0011.g012460 MEE55 not classified & original description: CDS=31-621 0.03 OrthoFinder output from all 47 species
Cba_g14549 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g17129 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g31734 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g01530 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g09268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g01593 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02984 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17902 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005018 No alias not classified & original description: CDS=1-1431 0.04 OrthoFinder output from all 47 species
Sam_g38431 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g11187 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12183 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR005016 TDE1/TMS 138 411
IPR005016 TDE1/TMS 422 500
No external refs found!