Sam_g19227


Description : not classified & original description: none


Gene families : OG0007406 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007406_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g19227

Target Alias Description ECC score Gene Family Method Actions
Als_g09945 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0371.g067111 No alias not classified & original description: CDS=142-1509 0.02 OrthoFinder output from all 47 species
Dde_g24824 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02480 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g46750.1 LOC_Os02g46750 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g30843 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g09380.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g00875 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g097130.3.1 Solyc03g097130 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e023276_P001 Zm00001e023276 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!