Sam_g19228


Description : not classified & original description: none


Gene families : OG0007406 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007406_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g19228
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Adi_g015807 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09945 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene72283.t1 Aspi01Gene72283 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72284.t1 Aspi01Gene72284 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.11G007400.1 Ceric.11G007400 not classified & original description: pacid=50595882... 0.04 OrthoFinder output from all 47 species
Dcu_g13403 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g24824 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os02g46750.1 LOC_Os02g46750 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g14228 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g30843 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp1g09380.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g00875 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g17018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60631 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08731 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g097130.3.1 Solyc03g097130 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g05259 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023276_P001 Zm00001e023276 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!