1. Home
  2. Species
  3. Salvinia molesta
  4. Sequence
  5. Sam_g19302

Sam_g19302


Description : methylation reader Alfin of PRC1 complex & original description: none


Gene families : OG0000258 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000258_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g19302

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00155940 AL5,... RNA biosynthesis.transcriptional activation.Alfin-like... 0.05 OrthoFinder output from all 47 species
AT5G05610 AL1 alfin-like 1 0.02 OrthoFinder output from all 47 species
AT5G20510 AL5 alfin-like 5 0.02 OrthoFinder output from all 47 species
Adi_g050291 AL7 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Ala_g10202 AL1 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Ala_g13113 AL1 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Als_g04779 AL2 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Als_g05455 AL2 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Als_g21260 AL1 methylation reader Alfin of PRC1 complex & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene09474.t1 AL1, Aspi01Gene09474 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Cba_g03032 AL2 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Cba_g23274 AL1 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Cba_g33236 AL2 methylation reader Alfin of PRC1 complex & original... 0.04 OrthoFinder output from all 47 species
Cba_g33237 AL1 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.30G070100.1 AL1, Ceric.30G070100 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021357.26 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g12437 AL2 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Dac_g30272 AL2 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Dde_g05713 AL2 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01016791001 AL5 RNA biosynthesis.transcriptional activation.Alfin-like... 0.03 OrthoFinder output from all 47 species
Gb_11603 AL5 Alfin-like transcription factor 0.02 OrthoFinder output from all 47 species
Gb_22969 AL5 Alfin-like transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os01g66420.1 AL5, LOC_Os01g66420 Alfin-like transcription factor 0.01 OrthoFinder output from all 47 species
Len_g12567 AL2 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Lfl_g01104 AL4 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
MA_10430679g0010 AL2 Alfin-like transcription factor 0.03 OrthoFinder output from all 47 species
Nbi_g04066 AL2 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Nbi_g04136 AL2 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Nbi_g04610 AL2 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Ore_g19754 AL2 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Pir_g03364 AL2 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Pir_g04668 AL2 methylation reader Alfin of PRC1 complex & original... 0.04 OrthoFinder output from all 47 species
Pir_g12876 AL1 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Pir_g13361 AL1 methylation reader Alfin of PRC1 complex & original... 0.05 OrthoFinder output from all 47 species
Ppi_g17589 AL4 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Ppi_g45953 AL1 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Ppi_g49107 AL2 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008866 AL2 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012709 AL1 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Sam_g18886 No alias methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Solyc01g102760.3.1 AL6, Solyc01g102760 Alfin-like transcription factor 0.03 OrthoFinder output from all 47 species
Solyc09g005360.3.1 AL1, Solyc09g005360 Alfin-like transcription factor 0.02 OrthoFinder output from all 47 species
Spa_g30132 AL2 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Tin_g03128 AL2 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Tin_g05421 AL2 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Tin_g15615 AL1 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Zm00001e006169_P001 AL2, Zm00001e006169 Alfin-like transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e028587_P002 AL4, Zm00001e028587 Alfin-like transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e035527_P001 AL5, Zm00001e035527 Alfin-like transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0042393 histone binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR021998 Alfin_N 9 134
IPR019787 Znf_PHD-finger 183 233
No external refs found!