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  5. Sam_g19328

Sam_g19328


Description : not classified & original description: none


Gene families : OG0000111 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000111_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g19328
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
ATMG00750 ORF119 GAG/POL/ENV polyprotein 0.02 OrthoFinder output from all 47 species
Adi_g002053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g008046 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g017230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g019611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g020838 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g020860 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g046502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g053894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g054402 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058890 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069109 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g078525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086630 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g092470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g111245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g125419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g125947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g00359 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g35114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25990 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g00199 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g57558 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05849.t1 Aspi01Gene05849 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07397.t1 Aspi01Gene07397 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36439.t1 Aspi01Gene36439 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06146 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g51825 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g55583 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g32237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g00221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g56615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59010 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g00371 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Sam_g00734 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Sam_g00993 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Sam_g02382 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sam_g09192 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Sam_g09349 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g17781 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sam_g18211 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g21246 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g24602 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g25600 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g27010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27690 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g28735 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Sam_g37627 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Sam_g40209 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Sam_g40458 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g40570 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g44272 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g48410 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Sam_g49068 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001584 Integrase_cat-core 120 217
IPR041588 Integrase_H2C2 47 105
No external refs found!