Sam_g19502


Description : CAPE precursor polypeptide & original description: none


Gene families : OG0000174 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000174_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g19502
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Adi_g015490 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28754 PR-1-LIKE CAPE precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g35068 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Cre02.g083100 No alias No description available 0.03 OrthoFinder output from all 47 species
Mp5g12540.1 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
Nbi_g26513 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g36775 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g42621 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g62327 PRB1, ATPRB1 CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c25_120V3.1 Pp3c25_120 CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.01 OrthoFinder output from all 47 species
Ppi_g33600 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g45456 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g47547 No alias CAPE precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Solyc08g068990.2.1 Solyc08g068990 Pathogenesis-related protein 1C OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
Spa_g41353 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004623 phospholipase A2 activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR014044 CAP_domain 32 163
No external refs found!